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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921668.1_cds_XP_016470586.1_63021
CDS Infomation

[gene=LOC107792850] [db_xref=GeneID:107792850] [protein=uncharacterized PKHD-type hydroxylase At1g22950-like] [protein_id=XP_016470586.1] [location=complement(join(53742..53777,53925..54036,55605..55723,56603..56727,56917..57003,57111..57261,57357..57533,57794..57841,58950..59288))] [gbkey=CDS]
Sequence

ATGTCTCAAGATGGCTCAGCAGCAGCAACAATGGATCGGAAGAAGGATTCTCAATCAACA
ACAAACCCTACCCGAAATGGTAACGGTAACGGTAACGGCGGAACAGCAACAAACGGCGCC
GTTTACCCGTCACTCAATTCTCTGAGGTTGCGTTTAAACCCTAGTATTGATCACAAGTCG
GATAATTATGAAGATCTTCAATTGGATTTTAGTCCATTGTTATTTAGCTCGCTCGAACGG
TACCTTCCGCCTACTCTCCTCAATTCGTCACGTGACCATAAAGTTCATTACATGCGGGAA
ATTCTCCTTAAGTATTGTCCTGAAGGTGAACGTACACGTGTGCAGAAGCATAGGGAATAC
CGACAGAAGATTATATCAAACTATCAGCCTCTACACAGGGAGTTATATACCATGCATGCT
GCGAATTTTTTTGTGCCATCATTTCTTAAGGCAATTAGCGAGAACACAGAGGAAAGTTAC
AGAAACATAATGTCGGAACCCTCTCCTGGAGTTTTAACATTTGAAATGCTTCAACCACGA
TTTTGTGAGATGATGTTGGCTGAGGTAGAAAACTTTGAAAGGTGGGTCCGCGAGACAAAG
TTCAGAATAATGCGTCCCAATACAATGAACAAATTTGGTGCCGTTCTTGATGACTTTGGC
CTCGAAACTATGCTTGACAAGTTGATGGAAGATTTCATTCGTCCCATTTCAAGAGTTTTC
TTTACTGAAGTTGGTGGATCCACACTTGATAGCCATCACGGTTTTGTTGTCGAGTATGGG
ATGGATAGAGATGTTGACTTGGGTTTTCATGTTGATGACTCAGAAGTAACTTTAAATGTG
TGCTTGGGTAAGCAATTCTCTGGTGGAGAGCTGTTCTTCCGTGGAGTGCGGTGTGAGAAG
CATGTAAATACTGAAACACAACCTGAGGAGATCTTTGATTACTCCCATGTCACGGGGCGT
GCAGTGCTTCATCGTGGTCGCCATCGGCATGGTGCTAGAGCAACAACATCGGGGCAGAGG
ATCAACTTGTTGTTGTGGTGCAGAAGTTCTGTCTTTAGAGAGCTAAGGAAGTACCAGAAA
GACTTTTCCGGCTGGTGTGCAGAGTGCCAGCGCGAGAAGAAGGAAAGGCAACGACTGTCC
ATTGCTGCTACTAAATTGGAGCTGCTGAAAAGAGAAGGGGAAGCTGCTACATAG

Peptide Sequence

PEP ID

XP_016470586.1
PEP Infomation

PREDICTED: uncharacterized PKHD-type hydroxylase At1g22950-like [Nicotiana tabacum]
Sequence

MSQDGSAAATMDRKKDSQSTTNPTRNGNGNGNGGTATNGAVYPSLNSLRLRLNPSIDHKS
DNYEDLQLDFSPLLFSSLERYLPPTLLNSSRDHKVHYMREILLKYCPEGERTRVQKHREY
RQKIISNYQPLHRELYTMHAANFFVPSFLKAISENTEESYRNIMSEPSPGVLTFEMLQPR
FCEMMLAEVENFERWVRETKFRIMRPNTMNKFGAVLDDFGLETMLDKLMEDFIRPISRVF
FTEVGGSTLDSHHGFVVEYGMDRDVDLGFHVDDSEVTLNVCLGKQFSGGELFFRGVRCEK
HVNTETQPEEIFDYSHVTGRAVLHRGRHRHGARATTSGQRINLLLWCRSSVFRELRKYQK
DFSGWCAECQREKKERQRLSIAATKLELLKREGEAAT

Transcript Sequence

Gene sequence data has not been registered.